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Carole Knibbe


Former LIRIS member since: 2017-08-31

Quality
Associate Professor
Team(s) Beagle
Institution 
Université Claude Bernard Lyon 1
Personal pagehttp://caroleknibbe.fr

Publications (IdHAL : carole-knibbe)

Publications LIRIS pour Carole Knibbe (55)

  • 2023 (1)
  • 2022 (1)
    • Others (1)
      •  Julie Etienne, Armelle Penhoat, Marie-Caroline Michalski & Carole Knibbe (2022). "Uptake of fatty acids by the enterocyte: the role of intracellular metabolism". 12th European Conference on Mathematical and Theoretical Biology, 19 septembre 2022, Heidelberg (France). Poster. HAL : hal-03921859.
  • 2021 (3)
    • HDR, thesis (1)
      • HDR (1)
        •  Carole Knibbe (2021). "Modèles computationnels de cellules biologiques pour l'évolution moléculaire et la nutrition". HAL : tel-03701421. .
    • Others (2)
      •  Julie Etienne, Armelle Penhoat, Marie-Caroline Michalski & Carole Knibbe (2021). "A mathematical model for the uptake of fatty acids by the enterocyte". EDISS 205 2021 - Journée de l'Ecole Doctorale Interdisciplinaire Sciences-Santé, 18 novembre 2021, Online (France). Poster. HAL : hal-03485600.
      •  Julie Etienne, Armelle Penhoat, Marie-Caroline Michalski & Carole Knibbe (2021). "Uptake of fatty acids by the enterocyte: New insights gained from mathematical modeling". AOCS Annual Meeting & Expo 2021, 3 mai 2021, Online (United States of America). Poster. HAL : hal-03252034.
  • 2020 (7)
    • Journals (5)
      • International journals with peer review (5)
        •  Chloé Robert, Charline Buisson, Leslie Couedelo, Carole Knibbe, Emmanuelle Meugnier, Emmanuelle Loizon, Laurence Fonseca, Fabienne Laugerette, Carole Vaysse & Marie-Caroline Michalski (2020). "Impact of vegetable lecithin on lipid metabolism and the bioavailability of alpha-linolenic acid in rodents". Journal of the American Oil Chemists' Society, vol. 97, pp. 66-66. HAL : hal-03531978.
        •  Marine Vincent, Olivia Ménard, Julie Etienne, Jordane Ossemond, Annie Durand, Rachel Buffin, Emmanuelle Loizon, Emmanuelle Meugnier, Amélie Deglaire et al. (2020). "Human milk pasteurisation reduces pre-lipolysis but not digestive lipolysis and moderately decreases intestinal lipid uptake in a combination of preterm infant in vitro models". Food Chemistry, vol. 329, p. 126927. doi : 10.1016/j.foodchem.2020.126927. HAL : hal-02862386. .
        •  Joel Lehman, Jeff Clune, Dusan Misevic, Christoph Adami, Julie Beaulieu, Peter J. Bentley, Samuel Bernard, Guillaume Beslon, David M. Bryson et al. (2020). "The Surprising Creativity of Digital Evolution: A Collection of Anecdotes from the Evolutionary Computation and Artificial Life Research Communities". Artificial Life, vol. 26, #2, pp. 274-306. doi : 10.1162/artl_a_00319. ArXiv : 1803.03453. HAL : hal-01735473. .
        •  Chloé Robert, Leslie Couëdelo, Carole Knibbe, Laurence Fonseca, Charline Buisson, Elisabeth Errazuriz-Cerda, Emmanuelle Meugnier, Emmanuelle Loizon, Carole Vaysse & Marie-Caroline Michalski (2020). "Rapeseed Lecithin Increases Lymphatic Lipid Output and α-Linolenic Acid Bioavailability in Rats". Journal of Nutrition, vol. 150, #11, pp. 2900-2911. doi : 10.1093/jn/nxaa244. HAL : hal-03149749.
        •  Charles Rocabert, Guillaume Beslon, Carole Knibbe & Samuel Bernard (2020). "Phenotypic noise and the cost of complexity". Evolution - International Journal of Organic Evolution. doi : 10.1111/evo.14083. HAL : hal-02920356. .
    • Others (2)
      •  Julie Etienne, Armelle Penhoat, Hugues Berry, Marie-Caroline Michalski & Carole Knibbe (2020). "Le trafic des triglycérides au travers de l’entérocyte : une vision mosaïque pour la modélisation mathématique". JFN 2020 - Journées Francophones de Nutrition, 18 novembre 2020, En ligne (France). Poster. HAL : hal-03149846.
      •  Sabine Danthine, Cécile Vors, Annie Durand, Frédéric Carrière, Carole Knibbe, Marion Létisse & Marie-Caroline Michalski (2020). "Homogeneous triacylglycerol tracers can impact fat crystallization and its lipolysis rate under simulated physiological conditions". Virtual 2020 AOCS Annual Meeting and Expo, 29 juin 2020, Montréal (Canada). Poster. HAL : hal-02917715.
  • 2019 (4)
  • 2018 (1)
    • Journals (1)
      • International journals with peer review (1)
        •  Carole Knibbe (2018). "Souvenirs from ECAL 2017: create, play, experiment, discover – revealing the experimental power of virtual worlds". Adaptive Behavior, vol. 26, #1, pp. 37-40. HAL : hal-01952933. .
  • 2017 (3)
    • Journals (1)
    • Conferences (2)
      • International conferences with peer review (1)
        •  Charles Rocabert, Carole Knibbe, Jessika Consuegra, Dominique Schneider & Guillaume Beslon (2017). "Environmental seasonality drives digital populations towards stable cross-feeding". European Conference on Artificial Life (ECAL), 8 septembre 2017, Villeurbanne (France). HAL : hal-01569093. .
      • National conferences with peer review (1)
  • 2016 (5)
    • Journals (1)
      • International journals with peer review (1)
        •  Priscila Biller, Laurent Guéguen, Carole Knibbe & Eric Tannier (2016). "Breaking Good: Accounting for Fragility of Genomic Regions in Rearrangement Distance Estimation". Genome Biology and Evolution, vol. 8, #5, pp. 1427-1439. doi : 10.1093/gbe/evw083. HAL : hal-01334923. .
    • Conferences (3)
      • International conferences with peer review (2)
        •  Charles Rocabert, Carole Knibbe, Jessika Consuegra, Dominique Schneider & Guillaume Beslon (2016). "In Silico Experimental Evolution Highlights the Influence of Environmental Seasonality on Bacterial Diversification". 2nd EvoEvo Workshop, satellite workshop of CCS2016, 20 septembre 2016, Amsterdam (Netherlands). HAL : hal-01375677. .
        •  Priscila Biller, Carole Knibbe, Guillaume Beslon & Eric Tannier (2016). "Comparative Genomics on Artificial Life". Computability in Europe, 27 juin 2016, Paris (France), pp. 35-44. HAL : hal-01334930.
      • National conferences with peer review (1)
        •  Priscila Biller, Eric Tannier, Guillaume Beslon & Carole Knibbe (2016). "In silico experimental evolution provides independent and challenging benchmarks for comparative genomics". Journées ouvertes Biologie Informatique Mathématiques, 30 juin 2016, Lyon (France), pp. 79-82. HAL : hal-01375657. .
    • Others (1)
  • 2015 (1)
    • Conferences (1)
      • International conferences with peer review (1)
  • 2014 (6)
  • 2013 (3)
    • Journals (1)
    • Conferences (1)
    • Book edition (books, chapters, seminars, congress, special numbers) (1)
      •  Carole Knibbe (2013). "L'évolution expérimentale in silico". Modéliser et simuler - Epistémologies et pratiques de la modélisation et de la simulation - Tome 1, Franck Varenne and Marc Silberstein, Editions Matériologiques, pp. 581-610. HAL : hal-00850175.
  • 2012 (3)
    • Journals (1)
      • International journals with peer review (1)
    • Conferences (1)
      • International conferences with peer review (1)
    • Others (1)
      •  Bérénice Batut, Mathilde Dumond, Gabriel Marais, Guillaume Beslon & Carole Knibbe (2012). "Simulating evolutionary scenarios to test whether they can induce reductive evolution". SMBE 2012 : Society for Molecular Biology and Evolution, 26 juin 2012, Dublin (Ireland). Poster. HAL : hal-00762597.
  • 2011 (2)
    • Conferences (2)
      • International conferences with peer review (2)
        •  Carole Knibbe, David P. Parsons & Guillaume Beslon (2011). "Parsimonious modeling of scaling laws in genomes and transcriptomes". Proceedings of the Eleventh European Conference on the Synthesis and Simulation of Living Systems (ECAL 11), 8 août 2011, Paris (France), pp. 414-415. HAL : hal-00696870.
        •  David Parsons, Carole Knibbe & Guillaume Beslon (2011). "Homologous and Nonhomologous Rearrangements: Interactions and Effects on Evolvability.". Proceedings of the Eleventh European Conference on the Synthesis and Simulation of Living Systems (ECAL 11), 8 août 2011, Paris (France), pp. 622-629. HAL : hal-00696902.
  • 2010 (5)
  • 2009 (2)
    • Conferences (2)
      • International conferences with peer review (1)
      • National conferences with peer review (1)
  • 2008 (3)
    • Journals (1)
      • National journals with peer review (1)
    • Conferences (2)
      • International conferences with peer review (1)
        •  Guillaume Beslon, Federica Calevro, Hubert Charles, Jean-Michel Fayard, Carole Knibbe, Stéphane Génieys & Marie-France Sagot (2008). "Evolution des organismes bactériens". Journée INSA de Lyon "BioIngénierie / Sciences et Ingénierie du Vivant", Villeurbanne (France), 12 diapos. HAL : hal-02822501.
      • National conferences with peer review (1)
        •  Guillaume Beslon, Sara Franceschelli & Carole Knibbe (2008). "Petits bricolages en évolution". "Génies de la Bricole et du Bricolage", colloque en hommage à Claude Levy-Strauss, 28 novembre 2008, Lyon (France). HAL : hal-01614309.
  • 2007 (3)
    • Journals (2)
      • National journals with peer review (2)
        •  C. Knibbe, A. Coulon, O. Mazet, J. M. Fayard & G. Beslon (2007). "A long-term evolutionary pressure on the amount of noncoding DNA". Molecular Biology and Evolution, vol. 24, #10, pp. 2344-2353. HAL : hal-00391447.
        •  C. Knibbe, O. Mazet, F. Chaudier, J. M. Fayard & G. Beslon (2007). "Evolutionary coupling between the deleteriousness of gene mutations and the amount of non-coding sequences". Journal of Theoretical Biology, vol. 244, #4, pp. 621-630. HAL : hal-00391449.
    • Conferences (1)
      • International conferences with peer review (1)
        •  Gaël Kaneko, Carole Knibbe & Guillaume Beslon (2007). "Effect of bottlenecks on genome size: investigations by digital genetics". Integrative Post-Genomics, 28 novembre 2007, Lyon (France). HAL : hal-01596355.
  • 2005 (2)
    • Conferences (1)
      • National conferences with peer review (1)
        •  G. Beslon & C. Knibbe (2005). "Modelling evolution of prokaryotic genomes: an integrative approach". FEBS Advanced Lecture Course, System Biology: From Molecules and Modeling to Cells, 3-INV (conférences invitées)
          3-INV (conférences invitées)          , Gosau (Autriche), 2005 (France), pp. 1-1          . HAL : hal-00391254.
    • Book edition (books, chapters, seminars, congress, special numbers) (1)
      •  C. Knibbe, G. Beslon, F. Chaudier & J. M. Fayard (2005). "Designing artificial organisms to study the influence of gene pleitropy on genome evolution". Proceedings of the System Biology Workshop at the 8th European Conference on Artificial Life (ECAL 2005), XXX, pp. 1-1. HAL : hal-00391534.