Publications LIRIS pour Anton Crombach (15)

• 2025 (1)
• Conferences (1)
• National conferences with peer review (1)
•  Lisa Chabrier, Anton Crombach, Sergio Peignier & Christophe Rigotti (2025). "Re_actShap : détection de rebranchements des réseaux de régulation d’expression génique à l’aide des valeurs SHAP". 25ième conference sur l'Extraction et Gestion des Connaissances (EGC), session demonstrations, Strasbourg (France), p. 8. HAL : hal-04877547. .
• 2024 (7)
• Journals (1)
• International journals with peer review (1)
•  Lisa Chabrier, Anton Crombach, Sergio Peignier & Christophe Rigotti (2024). "Effective pruning for top-k feature search on the basis of SHAP values". IEEE Access, vol. 12, pp. 163079-163092. doi : 10.1109/ACCESS.2024.3489958. HAL : hal-04549416. .
• Conferences (3)
• International conferences with peer review (2)
•  Lisa Chabrier, Anton Crombach, Sergio Peignier & Christophe Rigotti (2024). "Detecting gene regulatory network rewiring as changes in marker regulatory associations using only single-cell gene expression data". IEEE 12th Data Mining in Biomedical Informatics and Healthcare Workshop (DMBIH'24) at ICDM'24, Abu Dhabi (United Arab Emirates), p. 10. HAL : hal-04808464. .
•  Ruggero Pensa, Anton Crombach, Sergio Peignier & Christophe Rigotti (2024). "Combining SHAP-driven Co-clustering and Shallow Decision Trees to Explain XGBoost". 27th International Conference Discovery Science (DS'24), Pise (Italy), pp. 1-16. HAL : hal-04809871. .
• Other conferences (1)
•  Lisa Chabrier, Anton Crombach, Sergio Peignier & Christophe Rigotti (2024). "Unraveling regulatory associations using explainable AI". Journée GT Machine learning pour la génomique LEGO à JOBIM 2024, 25 juin 2024, Toulouse (France). HAL : hal-04783821.
• Others (3)
•  Thibaut Peyric, Anton Crombach & Thomas Guyet (2024). "Single-cell multi-omics data integration powered by PCA-like autoencoders". JOBIM 2024, 28 juin 2024, Toulouse (France). Poster. HAL : hal-04750060. .
•  Lisa Chabrier, Camille Leonce, Raphael Schneider, Cyril Dégletagne, Pierre Saintigny, Anton Crombach & Sandra Ortiz-Cuaran (2024). "Regulatory network inference of drug-tolerant persister cells". AACR (American Association for Cancer Research) annual meeting - poster session, 10 avril 2024, San Diego (California) (United States of America). Poster. HAL : hal-04879042.
•  Lisa Chabrier, Camille Leonce, Raphael Schneider, Cyril Dégletagne, Pierre Saintigny, Anton Crombach & Sandra Ortiz-Cuaran (2024). "Regulatory network inference of lung adenocarcinoma drug-tolerant persister cells". Computational Biology of Cancer – BioSyL 2024 (COBICA) - poster session, 18 mars 2024, Grenoble (France). Poster. HAL : hal-04879089.
• 2022 (1)
• Others (1)
•  Lisa Chabrier, Anton Crombach, Sergio Peignier & Christophe Rigotti (2022). "Semi-supervised learning for tree-based regressors to improve the prediction of the interactions between genes". Symposium MaDICS, 11 juillet 2022, Lyon (France). Poster. HAL : hal-03894314. .
• 2021 (3)
• Journals (1)
• International journals with peer review (1)
•  Sara Zeppilli, Tobias Ackels, Robin Attey, Nell Klimpert, Kimberly Ritola, Stefan Boeing, Anton Crombach, Andreas Schaefer & Alexander Fleischmann (2021). "Molecular characterization of projection neuron subtypes in the mouse olfactory bulb". eLife. doi : 10.7554/eLife.65445. HAL : hal-03473445.
• Book edition (books, chapters, seminars, congress, special numbers) (2)
•  Anton Crombach & Johannes Jaeger (2021). "Life’s Attractors Continued: Progress in Understanding Developmental Systems Through Reverse Engineering and In Silico Evolution". Evolutionary Systems Biology: Advances, Questions, and Opportunities. doi : 10.1007/978-3-030-71737-7_4. HAL : hal-03128711. .
•  Anton Crombach (2021). "Evolutionary Systems Biology". Anton Crombach, Springer International Publishing. doi : 10.1007/978-3-030-71737-7. HAL : hal-03473679.
• 2020 (1)
• Journals (1)
• International journals with peer review (1)
•  Julie Marin, Guillaume Achaz, Anton Crombach & Amaury Lambert (2020). "The genomic view of diversification". Journal of Evolutionary Biology, vol. 33, #10, pp. 1387-1404. doi : 10.1111/jeb.13677. HAL : hal-03137815.
• 2019 (1)
• Journals (1)
• International journals with peer review (1)
•  Elise Parey & Anton Crombach (2019). "Evolution of the Drosophila melanogaster Chromatin Landscape and Its Associated Proteins". Genome Biology and Evolution, vol. 11, #3, pp. 660-677. doi : 10.1093/gbe/evz019. HAL : hal-02064719.
• 2018 (1)
• Journals (1)
• International journals with peer review (1)
•  Berta Verd, Erik Clark, Karl Wotton, Hilde Janssens, Eva Jiménez-Guri, Anton Crombach & Johannes Jaeger (2018). "A damped oscillator imposes temporal order on posterior gap gene expression in Drosophila". PLoS Biology, vol. 16, #2, p. 24. doi : 10.1371/journal.pbio.2003174. HAL : hal-01934923.